Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804277.1_cds_XP_016488137.1_7846
CDS Infomation

[gene=LOC107808152] [db_xref=GeneID:107808152] [protein=probable methylenetetrahydrofolate reductase] [protein_id=XP_016488137.1] [location=join(32846..33250,34728..34788,34937..35019,35108..35281,36211..36384,36495..36595,36678..36789,37357..37437,37518..37695,38623..38957,39518..39601)] [gbkey=CDS]
Sequence

ATGAAGGTAATTGAGAAGATCCAAGAGGCAGCTAAAGATGAAAACAGGGTAGTATTTTCC
TTTGAATTTTTCCCACCAAAGACAGAAGATGGGGTTGAAAATCTATTCGAAAGAATGGAA
AGAATGGTAGCACATAACCCATCATTTTGTGATATAACGTGGGGTGCAGGTGGTTCAACA
GCAGATCTAACACTTGAGATTTCTAAAAGAATGCAAAATATGGTGTGTGTTGAAACTATG
ATGCATTTAACATGTACAAATATGCCTGTTGAAAAGATTGATCATGCTCTTGATACTATT
AAGATTAATGGTATTCAAAATGTTCTTGCTCTTCGTGGTGATCCTCCTCATGGTCAAGAT
AAGTTTGTTCAAGTTGAAGGTGGTTTTGCTTGTGCCTTGGATCTGGTGAAGCATATTCGT
GCCAAGTATGGGGACTACTTTGGGATAACTGTTGCTGGTTATCCAGAGGCACATCCTGAT
GTTATACCTGCTAATGGAATAGCTACACAAGAGATATATGAAAATGACCTTGCCTACCTC
AAAAGAAAGGTTGATGCTGGAGCTGATCTTATTGTAACTCAACTCTTCTATGATACTGAT
ATTTTCCTCAAATTTGTCAACGATTGCCGCCAACTTGGAATTACTTGCCCCATCGTCCCG
GGTATCATGCCCATTAACAATTACAAGGGCTTCTTGCGCATGACTGGATTTTGCAAGACT
AAGATTCCAGAAGAGATAATGGCTGCGTTGGAACCTATTAAGGACAACGAGGAGGCTGTC
AAAGCCTACGGAATTCACCTTGGAACTGAAATGTGCAAAAAGATTTTGGCCAGCGGCATT
AAGACTTTGCATCTTTATACATTAAACATGGAGAAATCAGCACTAGCCATTTTGATGAAT
CTTGGATTAATAGAAGAGTCCAAAATTTCTAGGCCATTGCCTTGGAGACGTCCTACAAAT
GTTTTCCGTGTCAAAGAAGATGTTCGTCCTATATTCTGGGCAAATCGTCCAAAGAGCTAC
ATCTCTAGGACCTTAGGTTGGGATGAATATCCACATGGTAGATGGGGCAATGCTCAAAAT
CCATCATACGGGGCACTTACCGACTATCAGTTCATGCGTGCACGGTCACGTGATAAGAAG
CTGCAAGAGGAATGGGCTGTGGCTTTGAATAGTGTGGACGATATCTATGAGAGATTTAAG
GACTACTGTCTTGGGAAGCTGAGGAGCTGCCCTTGGTCTGAATTAGACGGTCTTCAGCCA
GAGACAAAGATCATAAACGAAAAGTTGGGTCATATCAATACAAAAGGTTTCCTGACTATT
AACAGCCAACCTGCAGTTAATGCTGAGAAGTCTGACTCTCCTTCTGTTGGATGGGGCGGT
CCCGGTGGATATGTTTATCAAAAGGCTTACTTGGAGTTTTTCTGCTCCGGGGAGAAGTTA
AACACCCTCGTCGAAAAATGCAAGGCTTTCCCCTATCTAACATACATGGCTATAAACAAG
GAAGGAAACTGGATTTCCAACATCAGCCAAACTGATGTCAATGCGGTGACATGGGGAGCC
TTCCCAGCTAAGGAAATTGTACAACCGACAGTCGTTGATCCCGCCAGTTTCATGGTGTGG
AAGGATGAAGCATTTGAAATCTGGTCAAGAGGATGGGCTCAATTATACCCAGAGACTGAT
CCATCTAGAAAATTGCTTGAACAAGTTCAAAACAGTTACTACTTGGTCAGCCTTGTCGAT
AACGATTATATCAATGGCGATTTATTTTCCATTTTCAAAGATATCTAA

Peptide Sequence

PEP ID

XP_016488137.1
PEP Infomation

PREDICTED: probable methylenetetrahydrofolate reductase [Nicotiana tabacum]
Sequence

MKVIEKIQEAAKDENRVVFSFEFFPPKTEDGVENLFERMERMVAHNPSFCDITWGAGGST
ADLTLEISKRMQNMVCVETMMHLTCTNMPVEKIDHALDTIKINGIQNVLALRGDPPHGQD
KFVQVEGGFACALDLVKHIRAKYGDYFGITVAGYPEAHPDVIPANGIATQEIYENDLAYL
KRKVDAGADLIVTQLFYDTDIFLKFVNDCRQLGITCPIVPGIMPINNYKGFLRMTGFCKT
KIPEEIMAALEPIKDNEEAVKAYGIHLGTEMCKKILASGIKTLHLYTLNMEKSALAILMN
LGLIEESKISRPLPWRRPTNVFRVKEDVRPIFWANRPKSYISRTLGWDEYPHGRWGNAQN
PSYGALTDYQFMRARSRDKKLQEEWAVALNSVDDIYERFKDYCLGKLRSCPWSELDGLQP
ETKIINEKLGHINTKGFLTINSQPAVNAEKSDSPSVGWGGPGGYVYQKAYLEFFCSGEKL
NTLVEKCKAFPYLTYMAINKEGNWISNISQTDVNAVTWGAFPAKEIVQPTVVDPASFMVW
KDEAFEIWSRGWAQLYPETDPSRKLLEQVQNSYYLVSLVDNDYINGDLFSIFKDI

Transcript Sequence

Gene sequence data has not been registered.